Gastroenterology

Crohn Disease

Transmural inflammatory bowel disease with skip lesions, most commonly affecting the terminal ileum. Causes non-caseating granulomas, fistulae, strictures and extra-intestinal manifestations.

Last reviewed 11 May 2026 - MedicoMedics editorial team

Skip lesions and transmural inflammation of the terminal ileum in Crohn disease

Pathophysiology

Dysregulated Th1/Th17 immune response to luminal antigens in genetically susceptible hosts (NOD2/CARD15 mutations). Transmural inflammation produces cobblestone mucosa, deep fissures, non-caseating granulomas, fibrosis, strictures and fistulae. Skip lesions distinguish it from ulcerative colitis; any part of the GI tract from mouth to anus can be affected, terminal ileum most commonly.

Sources: ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481); ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Clinical presentation

Chronic diarrhoea (often non-bloody), crampy right lower quadrant pain, weight loss, fever, perianal disease (fissures, fistulae, abscesses) and oral aphthous ulcers. Extra-intestinal: erythema nodosum, pyoderma gangrenosum, uveitis/episcleritis, enteropathic arthritis, sacroiliitis, primary sclerosing cholangitis, gallstones and kidney stones (calcium oxalate) from malabsorption.

Sources: ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481); ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Diagnosis

Ileocolonoscopy with biopsies shows skip lesions, cobblestoning, aphthous ulcers, granulomas. Cross-sectional imaging: MR enterography or CT enterography for small bowel disease, strictures and fistulae. Labs: elevated CRP, faecal calprotectin, iron/B12/vitamin D deficiency, anaemia. Exclude infection (stool PCR, TB screen before biologics).

Sources: ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481); ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Management

Induction: corticosteroids (prednisolone or budesonide for ileal disease), exclusive enteral nutrition (paediatrics), biologics (anti-TNF - infliximab, adalimumab; anti-integrin - vedolizumab; anti-IL-12/23 - ustekinumab; JAK inhibitors) for moderate-to-severe disease. Maintenance: immunomodulators (azathioprine, methotrexate) ± biologics; avoid long-term steroids. Surgery for strictures, fistulae, perianal disease, failed medical therapy - not curative; disease recurs at anastomosis.

Sources: ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481); ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Complications & surveillance

Strictures with obstruction, enteroenteric/enterovesical/perianal fistulae, abscesses, malnutrition, B12 deficiency, osteoporosis. Colon cancer risk in long-standing colonic Crohn - surveillance colonoscopy 8-10 years after diagnosis. Smoking cessation is essential as smoking worsens disease and postoperative recurrence.

Sources: ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481); ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Sample USMLE-style MCQs

Try 5 questions on this topic. Practice hundreds more free with a trial.

Question 1

Which histopathologic feature is characteristic of Crohn disease?

Question 2

A young woman with terminal ileal Crohn develops calcium oxalate kidney stones. What is the mechanism?

Question 3

Which agent is preferred for maintenance of remission in a young adult with moderate ileocolonic Crohn who has responded to infliximab?

Question 4

Which test should be performed before starting anti-TNF therapy?

Question 5

Why does smoking cessation matter in Crohn disease?

References

Primary guidelines and peer-reviewed sources used for this entry. Reviewed 11 May 2026 by MedicoMedics editorial team.

  1. ACG Crohn Disease Guideline (Am J Gastroenterol 2018;113:481)
  2. ECCO Crohn Guidelines 2020 (J Crohns Colitis 2020;14:4)

Frequently asked

How does Crohn differ from ulcerative colitis?

Crohn is transmural, any part of the GI tract, skip lesions, granulomas, non-bloody diarrhoea common, fistula formation. UC is mucosal, continuous, limited to the colon, bloody diarrhoea, no granulomas.

Why do Crohn patients get kidney and gall stones?

Terminal ileal disease reduces bile-salt reabsorption; loss of bile salts causes cholesterol gallstones and unbound oxalate absorption produces calcium oxalate kidney stones.

Should smokers with Crohn stop smoking?

Yes. Smoking accelerates disease activity, increases surgical recurrence and reduces response to biologics.

Why screen for TB before starting anti-TNF therapy?

Anti-TNF agents can reactivate latent tuberculosis; screen with IGRA/TST and chest X-ray and treat LTBI before therapy.

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